Drivers of Setaria pumila (Poir.) Roem. et Schult growth and impact on forage quality in lowland Switzerland meadows

Invasive grasses (especially Setaria pumila (Poir.) Roem. et Schult) increasingly threaten meadows and pastures as a consequence of human impact and climate change. We conducted a study in 2012 and in 2013 to better understand the growing cycle and the influence of S. pumila on forage quality of lowland meadows. We observed a rapid increase of S. pumila presence and phytomass on the southern side of the Alps across the growing season. We measured (i) above‐ground phytomass, with a modified Corral‐Fenlon method; (ii) botanical composition using the linear point quadrat method; and (iii) grassland chemical composition by NIRs (near‐infrared spectroscopy) analyses. To test the hypothesis that S. pumila summer growth is related to specific climatic conditions, meteorological data (temperature, precipitation and evapotranspiration) were collected from meteorological stations near the study sites. Total phytomass was sorted into S. pumila and other species. We used a generalized linear mixed models (GLMM) and found the abundance of S. pumila to be inversely correlated with rainfall and the presence of other species, but positively correlated with temperature increase. The increase of S. pumila above‐ground phytomass production was linked to a reduction of forage quality.     

Synthesis of hydrophobic anthraquinoid magenta dyes having linear alkyl substituents

A new series of magenta dyes having different length of alkyl substituents was synthesized to dye unmodified polypropylene (PP) and ultra-high molecular weight polyethylene (UHMWPE) fiber. It could be concluded that the affinity of the dyes onto unmodified PP and UHMWPE fibers was increased with the increase of the length of alkyl substituents. The optimum length of alkyl group was determined as the longest dodecyl-substituted dye in this study. Their absorption spectra appeared almost the same at visible range, which meant that the length of alkyl substituents did not affect the color appearance of the dyes. The color fastness properties of the dyeings to washing, rubbing and light were good enough for commercialization.     

Ultrastructural analysis of sequential cyprinid herpesvirus 3 morphogenesis in vitro

Cyprinid herpesvirus 3 (CyHV‐3) is an alloherpesvirus, and it is the aetiological agent of koi herpesvirus disease. Although the complex morphogenic stages of the replication cycle of CyHV‐3 were shown to resemble that of other members of the Herpesvirales, detailed analysis of the sequence and timing of these events was not definitively determined. This study describes these features through a time course using cyprinid cell cultures (KF‐1 and CCB) infected with CyHV‐3 (KHV isolate, H361) and analysed by transmission electron microscopy. Rapid viral entry was noted, with high levels of intracellular virus within 1–4 h post‐infection (hpi). Intranuclear capsid assembly, paracrystalline array formation and primary envelopment of capsids occurred within 4 hpi. Between 1 and 3 days post‐infection (dpi), intracytoplasmic secondary envelopment occurred, as well as budding of infectious virions at the plasma membrane. At 5–7 dpi, the cytoplasm contained cytopathic vacuoles, enveloped virions within vesicles, and abundant non‐enveloped capsids; also there was frequent nuclear deformation. Several morphological features are suggestive of inefficient viral assembly, with production of non‐infectious particles, particularly in KF‐1 cells. The timing of this alloherpesvirus morphogenesis is similar to other members of the Herpesvirales, but there may be possible implications of using different cell lines for CyHV‐3 propagation.     

Interactions of baseflow habitat constraints: Macroinvertebrate drift,stream temperature,and physical habitat for anadromous salmon in the Calapooia River,Oregon

1. The Calapooia River in western Oregon supports a small winter steelhead trout (Oncorhynchus mykiss) population and historically supported spring Chinook salmon (Oncorhynchus tshawytscha). Early timber harvesting removed the riparian forest, and log transportation practices simplified the channel. Those disturbance legacies continue to affect fish habitat by limiting shade and channel complexity, complicating conservation efforts.
2. To evaluate juvenile salmonid rearing potential, macroinvertebrate drift, thermal regime and physical habitat were measured at eight sites in 24 km of the upper river during late summer baseflow.
3. Overall physical habitat was simple, with few functioning instream structures or pools. During the 22‐day drift study, flows declined and maximum site stream temperatures ranged from 23.1°C at the lower end to 16.4°C 24 km upstream.
4. Macroinvertebrate drift concentrations ranged from 0.7–13.7 ind. m^?3 with biomasses from 0.02–1.23 mg m^?3. Drift concentration biomass was higher upstream (P  = 0.006) than downstream and declined overall (P  < 0.001) during the study. Drift biomass was dominated by five taxon groups – Baetis tricaudatus, Calineuria californica, Hesperoperla pacifica, Simulium spp., and Chironomidae, which were 65% of total biomass. During twilight, total biomass and biomass of B. tricaudatus, Simulium spp., and Chironomidae (both larvae and adults) were higher.
5. Total drift declined dramatically over the study period owing to decreases in drift concentration and a 58% decline in discharge, greatly reducing overall drift and available food resources for juvenile‐rearing salmonids.
6. The upper catchment, both with cooler temperatures and higher food availability, provided the best conditions for juvenile anadromous salmonids to survive late summer conditions. Conservation consequences of climate change‐induced alterations in flow and temperature may further affect habitat quality for juvenile salmonids in this catchment in the coming decades.

     

Linking small pelagic fish and cetacean distribution to model suitable habitat for coastal dolphin species,Delphinus delphis and Tursiops truncatus,in the Greek Seas (Eastern Mediterranean)

1. A large‐scale assessment of the summertime suitable habitat for Delphinus delphis (short‐beaked common dolphin) and Tursiops truncatus (common bottlenose dolphin) in Greek Seas (Eastern Mediterranean) was conducted using data from dedicated and opportunistic cetacean surveys and published data records.
2. Using a presence/absence approach, generalized additive models were applied to define a suite of environmental, bathymetric and biotic factors that best describe common and bottlenose dolphin spatial distribution, during early (May, June, July) and late (August, September) summer.
3. A geographic information system (GIS) was used to integrate sightings data with environmental characteristics, distance from the coast and sardine probability of presence. These variables were considered as good proxies for defining species‐suitable habitat within the study area's coastal environment.
4. The final selected models were used to produce annual probability maps of the presence of the species in the entire Greek Seas, as a measure of habitat suitability. Based on the mean probability and standard deviation maps for the study period GIS techniques were subsequently used to determine the persistent (areas with high mean and low variation) and occasional (high mean and high variation) habitat of each species.
5. Results showed that there was a high probability of common dolphin presence in areas with a high probability of sardine presence. For bottlenose dolphin, higher probability of the presence of species occurred in areas closer to the shore, with a high probability of sardine presence and with high concentrations of chlorophyll‐a.
6. In both seasons, the North Aegean Sea and the Inner Ionian Sea Archipelago were indicated as the most suitable areas for common dolphin distribution. Persistent habitat areas of the bottlenose dolphin included enclosed seas, continental shelf waters, and waters surrounding islands. The indicated suitable areas are discussed along with deficiencies of the models and future implications for conservation.

Copyright © 2016 John Wiley & Sons, Ltd.     

Predation by invasive signal crayfish on early life stages of European barbel may be limited

1. To determine whether or not signal crayfish Pacifastacus leniusculus and native white‐clawed crayfish Austropotamobius pallipes prey on European barbel Barbus barbus eggs, interstitial free‐embryos and emergent larvae, experiments were undertaken in salmonid (substratum) incubators (six treatments, four controls) fitted with video recorders.
2. No corpses or remains of emergent barbel larvae or eggs, or parts thereof, were observed in any of the incubators containing buried eggs, and no emergent larvae showed any sign of attack. However, video evidence of a signal crayfish catching and consuming a barbel larva was obtained.
3. There were no statistically significant differences between white‐clawed and signal crayfish either in carapace length or weight at the beginning and end of the experiments. The conservation implications of these results are discussed.

     

Calibration and validation of optical chlorophyll‐measuring devices for use in predicting crude protein concentration in tropical grass herbage

The objective of this experiment was to evaluate the Fieldscout CM 1000 NDVI and Yara N‐Tester as easy‐to‐use and cost‐effective tools for predicting foliar chlorophylls (a, b and total) and crude protein (CP) concentrations in herbage from three tropical grass species. Optical chlorophyll measurements were taken at three stages (4, 8 and 12 weeks) of regrowth maturity in Guinea grass (Panicum maximum) and Mulato II (Brachiaria hybrid) and at 6 and 12 weeks maturity in Paspalum spp (Paspalum atratum). Grass samples were harvested subsequent to optical measurements for laboratory analysis to determine CP and solvent‐extractable chlorophylls (a, b and total) concentrations. Optical chlorophyll measurements and CP concentrations were highly correlated (Yara N‐Tester: r² = 0·77–0·89; Fieldscout CM 1000 NDVI: r² = 0·52–0·84). Crude protein prediction models from the Yara N‐Tester and Fieldscout CM 1000 NDVI accounted for 70–89% and 44–73% CP variability, respectively, in Mulato II and Guinea grass. The Yara N‐tester produced more accurate and reliable CP estimates based on very high concordance correlation coefficient [CCC (0·73–0·91)] and low rMSPE, mean and regression bias. It is concluded that the Yara N‐Tester produces more accurate and reliable CP estimates of tropical pastures.     

Impact of sublethal di‐n‐butyl phthalate on the aquaculture fish species Nile tilapia (Oreochromis niloticus): histopathology and oxidative stress assessment

Phthalates such as di‐n‐butyl phthalate (DBP) and their esters are widely used plasticizers, their ubiquitous presence in daily life, inevitably leads to their restricted use due to important environmental pollution and health impacts and endocrine disruption potential. The aim of this study was to examine the effects of a sublethal concentration of 10 mg L^?1 DBP on haematocrit (HCT) values, gills and liver histology, malondialdehyde (MDA, 2‐thiobarbituric acid‐TBA reactivity) and reduced glutathione (GSH) levels in gills and liver tissue as oxidative stress biomarkers in the aquaculture fish species Nile tilapia (Oreochromis niloticus) after 24 (DBP‐24) and 96 (DBP‐96) h exposure. No differences were found between per cent HCT values in the 24 h exposure groups (P > 0.05). Response of antioxidant defence systems in liver and gill tissues of the fish were dependent on exposure duration and changed to a higher extent during 96 h. MDA levels in liver tissue increased in DBP treated fish in comparison to the control fish. However, the differences between the exposure and control groups were not significant (P > 0.05). A statistically significant decrease (P > 0.05) was recorded in gill MDA levels in the DBP‐96 group when compared to the control and DBP‐24 groups. The liver GSH levels were unchanged in the DBP treated fish. However, GSH levels were significantly lower in the gill tissue of the DBP‐96 group. Exposure to DBP caused several degenerative changes in the histology of gill and liver tissue. Gills displayed hyperaemia, epithelial lifting, oedema, talengiectasia, epithelial hyperplasia and fusion of secondary lamellae, whereas in liver several circulatory anomalies (hyperaemia, blood congestion and sinosoid dilatation) and vacuolization of hepatocytes were observed. Histopathological results demonstrated that the gills were more affected than the liver perhaps due to their direct contact with DBP.     

Aloysia triphylla essential oil as food additive for Rhamdia quelen – Stress and antioxidant parameters

We examined the effects of dietary supplementation for 21 days with different levels (0, 0.25 and 2.0 ml/kg) of the Aloysia triphylla essential oil (EOAT) on silver catfish (Rhamdia quelen). Cortisol levels were lower in fish fed EOAT at 2.0 ml/kg diet, and lactate levels were lower in those fed at both doses. Glucose, alanine aminotransferase, aspartate aminotransferase and triglyceride levels did not vary between groups. The biomarkers of oxidative stress, thiobarbituric acid‐reactive substances, lipid hydroperoxide, superoxide dismutase, catalase and non‐protein thiols, were lower in the brain, liver and muscle of fish fed EOAT at 2.0 ml EO/kg diet. Glutathione‐S‐transferase, reduced glutathione, plasma Na⁺, Cl^?, and K⁺, and gill Na⁺/K⁺‐ATPase and H⁺‐ATPase did not vary between groups. Taken together, our results clearly indicate that the addition of EOAT at 2.0 ml/kg diet improves oxidative status and lowers the stress response in silver catfish.